Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_7248372_7248448_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7248372 - 7248448

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGGCA

5'SS Class:

major

3'SS Sequence:

GTGTTTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGGCAA

U12 Branch Point Sequence:

AAGGACACGACG

Flanking Amino Acid:

HELTHAFDDQGREYDKDGNL

Intron Amino Acid Position:

601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

66.9

38.7

Major BPS

43.7

-0.3

1.3

47.1

37.9

Major PPT

75.7

0.58

1.1

72.9

42.2

Minor 5ss

28.4

-2.5

3.6

38.8

46.4

Minor BPS

-1.1

1.9

38.9

Associated Gene:

Gene:

ECE1

Ensembl Gene ID:

ENSAPLG00000004527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021168

7239289 - 7250920

11632

ENSAPLT00000017852

7239289 - 7250920

11632

ENSAPLT00000004703

7240471 - 7250920

10450