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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7431343_7432800_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7431343 - 7432800

Intron Length:

1458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTAG

5'SS Class:

major

3'SS Sequence:

TTACGTCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TAGACAGTAACC

Flanking Amino Acid:

PAEGGEEVKADAEATSEESA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

60.1

41.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

76.4

0.59

0.9

36.5

Minor 5ss

34.4

-1.8

3.5

49.3

Minor BPS

47.1

-0.2

2.3

61.72

43.1

Associated Gene:

Gene:

HP1BP3

Ensembl Gene ID:

ENSAPLG00000005878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006131

7430609 - 7444777

14169