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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7435523_7437159_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7435523 - 7437159

Intron Length:

1637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

ATGTGTATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

TGATGCGTAAAA

Flanking Amino Acid:

KTVPKARDRKKSTSASTPEQ

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

72.5

39.9

Major BPS

71.2

0.53

37.5

Major PPT

74.9

0.56

70.9

43.7

Minor 5ss

37.3

-1.4

47.6

47.9

Minor BPS

46.1

-0.3

2.4

62.34

43.4

Associated Gene:

Gene:

HP1BP3

Ensembl Gene ID:

ENSAPLG00000005878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006131

7430609 - 7444777

14169