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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7437315_7438098_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7437315 - 7438098

Intron Length:

784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

TCCTCCTGTATT

Flanking Amino Acid:

QYYPKLKVDVRPQLLKNALQ

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

0.68

0.9

35.9

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

55.5

0.26

1.8

72.38

44.7

Associated Gene:

Gene:

HP1BP3

Ensembl Gene ID:

ENSAPLG00000005878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006131

7430609 - 7444777

14169