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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7442764_7443594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7442764 - 7443594

Intron Length:

831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGAGAT

U12 Branch Point Sequence:

TTCTTTCTGACA

Flanking Amino Acid:

SEEEEPPPKKRMQKRPPPKS

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.5

30.7

Major BPS

51.7

0.04

1.3

50.1

44.2

Major PPT

82.3

0.73

0.9

79.8

32.3

Minor 5ss

39.1

-1.2

3.1

51.5

45.7

Minor BPS

56.6

0.2

1.6

70.09

36.3

Associated Gene:

Gene:

HP1BP3

Ensembl Gene ID:

ENSAPLG00000005878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006131

7430609 - 7444777

14169