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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_744670_746892_R

Intron Information:

Intron Rank:
20
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
744670 - 746892
Intron Length:
2223

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAACTCTC
5'SS Class:
strong_major
3'SS Sequence:
TGATAATTTGTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTGAAT
U12 Branch Point Sequence:
ATTCTCTGAATT
Flanking Amino Acid:
DNGGVRQAYKAYLKWLEREG
Intron Amino Acid Position:
684

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
82.2
0.76
1.1
76.2
39.9
Major BPS
74.6
0.61
1.4
84
34.5
Major PPT
69.7
0.44
1
63.1
42.7
Minor 5ss
44.3
-0.6
2.9
61.9
42.7
Minor BPS
66.3
0.59
1.4
80.65
34.6

Associated Gene:

Gene:
MMEL1
Ensembl Gene ID:
ENSAPLG00000006431
Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000006765
743753 - 769550
25798