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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7449870_7450907_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
7449870 - 7450907

Intron Length:
1038

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAGGTGCA

5'SS Class:
major

3'SS Sequence:
CTCTCTGCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AACCCAT

U12 Branch Point Sequence:
CCACCAAAAACC

Flanking Amino Acid:
RPSASARWVQGSGGRRLRAE

Intron Amino Acid Position:
23

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76
0.61
1.1
66
40.2

Major BPS
55.7
0.14
1.2
64.4
33.7

Major PPT
78.2
0.63
0.8
72.5
32.2

Minor 5ss
31.1
-2.2
3.3
32.2
42.4

Minor BPS
40.4
-0.7
2
46.79
41.8

Associated Gene:

Gene:
KIF17

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7449392 - 7473152
23761