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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7451272_7451341_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
7451272 - 7451341

Intron Length:
70

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGTGCA

5'SS Class:
strong_major

3'SS Sequence:
TCGTCCCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCCCAC

U12 Branch Point Sequence:
CGGTGCCCACCC

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.3
0.97
0.7
80.2
27.1

Major BPS
48.9
-0
1.3
58.1
40.4

Major PPT
71.3
0.48
0.8
62.2
34.7

Minor 5ss
27.5
-2.6
3
32.5
42.3

Minor BPS
36.6
-1
2.2
43.65
43.8

Associated Gene:

Gene:
KIF17

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7451169 - 7473152
21984