Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_7477262_7477405_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7477262 - 7477405

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGTTCC

5'SS Class:

major

3'SS Sequence:

GACTCTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

AATTGCTCATGT

Flanking Amino Acid:

PFVRTFLKRNGGKYSVQFKL

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

67.1

39.5

Major BPS

79.7

0.74

79.6

35.6

Major PPT

71.3

0.48

0.8

69.2

36.6

Minor 5ss

40.6

-1.1

3.1

53.9

43.4

Minor BPS

43.1

-0.4

2.3

63.77

46.2

Associated Gene:

Gene:

DDOST

Ensembl Gene ID:

ENSAPLG00000006961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007246

7471532 - 7478489

6958