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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7532228_7532415_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7532228 - 7532415

Intron Length:

188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAC

U12 Branch Point Sequence:

CCTCACTTAACC

Flanking Amino Acid:

CEHLDHALLYGLQDLSSGYW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.2

32.2

Major BPS

68.3

0.45

69.6

32.8

Major PPT

88.1

0.86

0.7

80.5

31.5

Minor 5ss

38.2

-1.3

3.4

49.9

46.4

Minor BPS

64.1

0.42

1.6

68.91

42.5

Associated Gene:

Gene:

PLEKHM2

Ensembl Gene ID:

ENSAPLG00000012347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012885

7528757 - 7547943

19187

ENSAPLT00000047012

7523034 - 7548930

25897

ENSAPLT00000033614

7526477 - 7548162

21686

ENSAPLT00000031867

7523034 - 7548930

25897

ENSAPLT00000030096

7523034 - 7548930

25897

ENSAPLT00000048302

7523034 - 7547943

24910