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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7534722_7536531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7534722 - 7536531

Intron Length:

1810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

GTCGTTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

ACTTCATTAACC

Flanking Amino Acid:

DDSAIAPSSEGASPFPGNVG

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.7

85.2

32.2

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

70.6

0.46

65.6

39.9

Minor 5ss

34.4

-1.8

3.3

49.7

46.6

Minor BPS

72.8

0.69

1.6

78.19

37.1

Associated Gene:

Gene:

PLEKHM2

Ensembl Gene ID:

ENSAPLG00000012347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033614

7526477 - 7548162

21686

ENSAPLT00000031867

7523034 - 7548930

25897

ENSAPLT00000030096

7523034 - 7548930

25897

ENSAPLT00000048302

7523034 - 7547943

24910

ENSAPLT00000012885

7528757 - 7547943

19187

ENSAPLT00000047012

7523034 - 7548930

25897