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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7536661_7537045_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7536661 - 7537045

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTCGTTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATTTCTAATCC

Flanking Amino Acid:

NESNNTVSVGDYDFGDVIPA

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.08

0.7

85.2

32.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.5

0.69

0.8

76.2

32.4

Minor 5ss

36.3

-1.6

3.3

48.7

47.5

Minor BPS

56.3

0.18

1.9

70.87

40.6

Associated Gene:

Gene:

PLEKHM2

Ensembl Gene ID:

ENSAPLG00000012347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047012

7523034 - 7548930

25897

ENSAPLT00000033614

7526477 - 7548162

21686

ENSAPLT00000030096

7523034 - 7548930

25897

ENSAPLT00000012885

7528757 - 7547943

19187

ENSAPLT00000048302

7523034 - 7547943

24910