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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_753707_754279_R

Intron Information:

Intron Rank:
14
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
753707 - 754279
Intron Length:
573

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTCAGAGAA
5'SS Class:
major
3'SS Sequence:
TCTTTTCTTCTAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
ATCAAAT
U12 Branch Point Sequence:
AATGAATCAAAT
Flanking Amino Acid:
EASKEKAREKAMAIKEQIGY
Intron Amino Acid Position:
495

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
76.5
0.62
1.3
71.3
34.5
Major BPS
68.5
0.46
1
73.3
28.9
Major PPT
87.5
0.84
0.6
81.2
30.9
Minor 5ss
25.2
-2.9
3
29.7
43.1
Minor BPS
42.5
-0.4
2
60.1
42.2

Associated Gene:

Gene:
MMEL1
Ensembl Gene ID:
ENSAPLG00000006431
Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000006765
743753 - 769550
25798