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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7544330_7544659_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7544330 - 7544659

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

GTATGTGGCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTTAA

U12 Branch Point Sequence:

GCTTCCTTAACC

Flanking Amino Acid:

VSYNELDYISVGLDQQTVTL

Intron Amino Acid Position:

684

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

68.2

36.6

Major BPS

69.7

0.49

59.9

38.5

Major PPT

59.7

0.22

1.1

52.9

45.8

Minor 5ss

32.8

-2

3.3

51.5

44.9

Minor BPS

84.8

1.08

1.1

83.37

36.3

Associated Gene:

Gene:

PLEKHM2

Ensembl Gene ID:

ENSAPLG00000012347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033614

7526477 - 7548162

21686

ENSAPLT00000031867

7523034 - 7548930

25897

ENSAPLT00000030096

7523034 - 7548930

25897

ENSAPLT00000048302

7523034 - 7547943

24910

ENSAPLT00000012885

7528757 - 7547943

19187

ENSAPLT00000047012

7523034 - 7548930

25897