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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7545568_7545856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7545568 - 7545856

Intron Length:

289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCTAAATGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCTTCCTAAATG

Flanking Amino Acid:

EQWKTCFVVLSNGILYQYPD

Intron Amino Acid Position:

821

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

87.6

0.93

0.9

89.3

Major PPT

63.8

0.31

1.1

58.8

40.6

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

67.4

0.41

1.7

70.75

43.1

Associated Gene:

Gene:

PLEKHM2

Ensembl Gene ID:

ENSAPLG00000012347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033614

7526477 - 7548162

21686

ENSAPLT00000031867

7523034 - 7548930

25897

ENSAPLT00000030096

7523034 - 7548930

25897

ENSAPLT00000048302

7523034 - 7547943

24910

ENSAPLT00000012885

7528757 - 7547943

19187

ENSAPLT00000047012

7523034 - 7548930

25897