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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7547268_7547655_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7547268 - 7547655

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CCGCACATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTTAT

U12 Branch Point Sequence:

TTTGGTTTATCC

Flanking Amino Acid:

LNAAWRNIYQVDLLHKAILD

Intron Amino Acid Position:

996

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

63.5

0.34

1.4

57.4

49.1

Major PPT

67.2

0.39

0.9

62.1

38.3

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

50.8

2.1

69.42

42.8

Associated Gene:

Gene:

PLEKHM2

Ensembl Gene ID:

ENSAPLG00000012347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048302

7523034 - 7547943

24910

ENSAPLT00000033614

7526477 - 7548162

21686

ENSAPLT00000012885

7528757 - 7547943

19187