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Intron Name: Anas_platyrhynchos_platyrhynchos_22_761323_761711_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
761323 - 761711

Intron Length:
389

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGGAGTG

5'SS Class:
strong_major

3'SS Sequence:
GTTCCTTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTCAC

U12 Branch Point Sequence:
AAAATCTCACTG

Flanking Amino Acid:
LRDELEIILKGVLETSDQGD

Intron Amino Acid Position:
146

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.1
0.73
1
69.9
41.1

Major BPS
76.2
0.65
0.9
77.4
26.5

Major PPT
77.5
0.62
0.8
69.3
36.9

Minor 5ss
32.6
-2
3.7
46.1
49.1

Minor BPS
42.1
-0.7
1.7
40.58
37.2

Associated Gene:

Gene:
MMEL1

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

743753 - 769550
25798