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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7680665_7683861_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7680665 - 7683861

Intron Length:

3197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGATG

5'SS Class:

major

3'SS Sequence:

GTCTTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

CATGCCTCAAAT

Flanking Amino Acid:

VCKQWYRLIKGVAHQCYHGF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

66.9

44.1

Major BPS

0.52

1.1

77.7

35.3

Major PPT

80.5

0.69

0.8

73.5

37.1

Minor 5ss

34.2

-1.8

3.5

47.9

47.8

Minor BPS

54.5

0.22

1.8

70.84

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027307

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024287

7673469 - 7684111

10643