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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7769576_7776784_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7769576 - 7776784

Intron Length:

7209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

AAAGTCTTACCC

Flanking Amino Acid:

NTGVINAPQKVIEDFYNRTW

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.6

36.5

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

82.7

0.74

0.7

76.8

25.1

Minor 5ss

25.3

-2.8

3.1

30.1

43.1

Minor BPS

50.4

-0

1.7

58.22

40.5

Associated Gene:

Gene:

SLC2A1

Ensembl Gene ID:

ENSAPLG00000005941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048389

7717224 - 7780506

63283