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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7779088_7779267_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7779088 - 7779267

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CCCCATCTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACACAT

U12 Branch Point Sequence:

TCTCCCCCATCT

Flanking Amino Acid:

VVNTAFTVVSLFVVERAGRR

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

84.3

29.3

Major BPS

61.1

0.28

29.8

Major PPT

65.1

0.34

59.7

35.3

Minor 5ss

41.2

-1

45.5

Minor BPS

46.9

-0.1

2.1

70.76

45.5

Associated Gene:

Gene:

SLC2A1

Ensembl Gene ID:

ENSAPLG00000005941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048389

7717224 - 7780506

63283

ENSAPLT00000006222

7776332 - 7780506

4175