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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7798702_7798914_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7798702 - 7798914

Intron Length:

213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTACCGGGG

5'SS Class:

weak_major

3'SS Sequence:

GTGTCTCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTGAC

U12 Branch Point Sequence:

GTGTCTCTCACA

Flanking Amino Acid:

RAAARALAPFGSSVMFYLAA

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.4

0.11

1.3

41.1

45.6

Major BPS

48.3

-0.1

1.3

40.8

41.4

Major PPT

75.1

0.56

0.9

68.6

37.3

Minor 5ss

33.6

-1.9

3.8

45.9

49.3

Minor BPS

48.9

-0

2.1

64.47

42.1

Associated Gene:

Gene:

PPCS

Ensembl Gene ID:

ENSAPLG00000020945

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032677

7798250 - 7800576

2327