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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7828897_7829899_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7828897 - 7829899

Intron Length:

1003

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAACCTT

5'SS Class:

major

3'SS Sequence:

TTTCTTCTTCAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

ATCTCTTTGATT

Flanking Amino Acid:

QNLTDEQELVRSELLESNKK

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

66.4

44.9

Major BPS

0.85

0.9

39.9

Major PPT

80.4

0.68

79.5

32.9

Minor 5ss

43.6

-0.7

3.3

65.8

45.3

Minor BPS

72.1

0.78

1.1

80.61

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005725

7816220 - 7833965

17746