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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7864311_7864626_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7864311 - 7864626

Intron Length:

316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGGCAC

5'SS Class:

major

3'SS Sequence:

GCTGCCTTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCTT

U12 Branch Point Sequence:

CTTCTCTCCCCT

Flanking Amino Acid:

PPAGGDKKVIATKVLGTVKW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

60.4

40.3

Major BPS

37.5

-0.7

4.3

79.6

35.6

Major PPT

75.4

0.57

0.9

65.2

41.1

Minor 5ss

26.1

-2.7

3.1

33.6

41.9

Minor BPS

-0.9

3.5

64.73

45.8

Associated Gene:

Gene:

YBX1

Ensembl Gene ID:

ENSAPLG00000004899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048396

7864151 - 7873838

9688

ENSAPLT00000034367

7863898 - 7872669

8772

ENSAPLT00000005056

7864151 - 7873838

9688