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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7868267_7870232_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7868267 - 7870232

Intron Length:

1966

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATCC

5'SS Class:

strong_major

3'SS Sequence:

ATTGTGTTGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

AATTCTGCAATA

Flanking Amino Acid:

DTKEDVFVHQTAIKKNNPRK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

78.6

29.6

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

0.38

1.1

66.3

44.6

Minor 5ss

39.2

-1.2

51.6

45.1

Minor BPS

-0.1

2.1

62.96

37.7

Associated Gene:

Gene:

YBX1

Ensembl Gene ID:

ENSAPLG00000004899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048396

7864151 - 7873838

9688

ENSAPLT00000034367

7863898 - 7872669

8772

ENSAPLT00000005056

7864151 - 7873838

9688