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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7871329_7871434_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7871329 - 7871434

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTGC

5'SS Class:

strong_major

3'SS Sequence:

GCTTGACTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

CCTAGCTTGACT

Flanking Amino Acid:

MYRGYRPRFRRGPPRQRQPR

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.8

41.1

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

75.1

0.56

0.9

70.1

40.4

Minor 5ss

51.1

0.04

2.4

67.9

43.4

Minor BPS

55.9

0.27

1.9

71.55

45.6

Associated Gene:

Gene:

YBX1

Ensembl Gene ID:

ENSAPLG00000004899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005056

7864151 - 7873838

9688

ENSAPLT00000048396

7864151 - 7873838

9688

ENSAPLT00000034367

7863898 - 7872669

8772