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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7871701_7873443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

7871701 - 7873443

Intron Length:

1743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGCGTGCC

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTATATCTGATT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.1

60.9

39.4

Major BPS

79.2

0.73

75.3

39.4

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

-2.6

3.1

26.9

36.6

Minor BPS

49.7

0.06

1.8

73.35

37.5

Associated Gene:

Gene:

YBX1

Ensembl Gene ID:

ENSAPLG00000004899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005056

7864151 - 7873838

9688