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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7883600_7885100_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
7883600 - 7885100

Intron Length:
1501

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGA|GTACGTCTG

5'SS Class:
major

3'SS Sequence:
TTTTGACTTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTGAC

U12 Branch Point Sequence:
TCTCTTTTGACT

Flanking Amino Acid:
YRQSQPSTAREPHVKISSPV

Intron Amino Acid Position:
124

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.2
0.36
1.1
57.5
47.2

Major BPS
86.5
0.91
0.8
77.4
37.4

Major PPT
84.4
0.77
0.8
78.1
35.3

Minor 5ss
38
-1.3
3.2
46.1
43.2

Minor BPS
68.2
0.65
1.2
79.65
36.7

Associated Gene:

Gene:
CLDN19

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7881697 - 7886769
5073