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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7928373_7933972_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7928373 - 7933972

Intron Length:

5600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TGCCCCTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAAAAAT

U12 Branch Point Sequence:

AAAAATGAGACT

Flanking Amino Acid:

KYVECSALTQKGLKNVFDEA

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.5

1.02

0.7

25.3

Major BPS

50.5

0.01

1.1

57.3

34.4

Major PPT

79.8

0.67

0.8

76.5

32.1

Minor 5ss

36.4

-1.5

3.6

55.7

48.5

Minor BPS

35.8

-1

2.1

48.24

38.2

Associated Gene:

Gene:

CDC42

Ensembl Gene ID:

ENSAPLG00000003997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033349

7921225 - 7943199

21975

ENSAPLT00000042314

7921225 - 8080771

159547

ENSAPLT00000029997

7921225 - 7940502

19278

ENSAPLT00000040760

7921225 - 7938320

17096

ENSAPLT00000004096

7921225 - 7955123

33899

ENSAPLT00000039471

7921225 - 7962347

41123

ENSAPLT00000034098

7921225 - 7990353

69129

ENSAPLT00000043944

7921225 - 8060102

138878