Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_793063_793839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

793063 - 793839

Intron Length:

777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TCCCATTGTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCTCTCCCATT

Flanking Amino Acid:

KKGFLYDGNQLLKKVIKIGD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

100

1.24

0.5

100

Major PPT

62.7

0.29

1.1

66.7

38.2

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

44.8

-0.3

2.2

68.25

43.4

Associated Gene:

Gene:

TTC34

Ensembl Gene ID:

ENSAPLG00000006420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006648

784133 - 794768

10636