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Intron Name: Anas_platyrhynchos_platyrhynchos_23_148017_150677_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148017 - 150677

Intron Length:

2661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

TGTTCCATATGT

Flanking Amino Acid:

ICIEIIFESKMNTVFHSNIQ

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

80.5

0.69

0.8

72.9

37.4

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

51.6

0.13

2.2

77.83

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044748

118388 - 173720

55333

ENSAPLT00000008222

118388 - 196017

77630