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Intron Name: Anas_platyrhynchos_platyrhynchos_23_1604002_1604402_R

Intron Information:

Intron Rank:

133126

Intron Class:

major

Intron Phase:

Intron Coordinates:

1604002 - 1604402

Intron Length:

401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

TTCCAAATGAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

78.9

0.65

0.7

69.8

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

38.4

-0.9

2.1

50.67

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034441

1558705 - 1604438

45734