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Intron Name: Anas_platyrhynchos_platyrhynchos_23_1669476_1674160_R

Intron Information:

Intron Rank:

145823

Intron Class:

major

Intron Phase:

Intron Coordinates:

1669476 - 1674160

Intron Length:

4685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCGCGC

5'SS Class:

major

3'SS Sequence:

GCTTGTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

ACTTTCTGAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.2

51.4

45.5

Major BPS

82.1

0.8

71.6

36.4

Major PPT

72.9

0.52

0.9

65.1

41.2

Minor 5ss

42.7

-0.8

3.2

59.6

45.1

Minor BPS

64.5

0.43

1.4

69.02

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041293

1653814 - 1674398

20585