Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_1733567_1734457_R

Intron Information:

Intron Rank:

147850

Intron Class:

major

Intron Phase:

Intron Coordinates:

1733567 - 1734457

Intron Length:

891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTATGTAAA

5'SS Class:

major

3'SS Sequence:

CTTTTTATTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGGCTTTTTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.3

75.9

35.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.6

0.78

0.7

78.1

Minor 5ss

42.5

-0.8

2.5

49.6

40.4

Minor BPS

49.4

0.04

1.6

64.98

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026020

1732798 - 1734538

1741