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Intron Name: Anas_platyrhynchos_platyrhynchos_23_18080_19071_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

18080 - 19071

Intron Length:

992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATGCACTTGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.1

39.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

80.1

0.68

0.8

73.7

29.6

Minor 5ss

27.9

-2.5

3.2

39.3

46.1

Minor BPS

62.4

0.47

1.5

76.31

39.9

Associated Gene:

Gene:

STAMBP

Ensembl Gene ID:

ENSAPLG00000005548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005765

18031 - 34623

16593