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Intron Name: Anas_platyrhynchos_platyrhynchos_23_1904734_1907623_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1904734 - 1907623

Intron Length:
2890

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATA|GTAAGGATG

5'SS Class:
major

3'SS Sequence:
TTGTCTGTTCCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTGCAT

U12 Branch Point Sequence:
TTTGCATCACGT

Flanking Amino Acid:
KTISAKTHNISLEYNIFEGM

Intron Amino Acid Position:
532

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.2
0.55
1
68.9
41.6

Major BPS
75
0.62
1.4
85.7
34.9

Major PPT
81.1
0.7
0.9
73.1
42.1

Minor 5ss
37.7
-1.4
3.3
50.4
41.3

Minor BPS
43.6
-0.4
2.3
69.07
47.4

Associated Gene:

Gene:
DPYSL2

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1901873 - 1950071
48199