About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_1908933_1911925_R

Intron Information:

Intron Rank:
9
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
1908933 - 1911925
Intron Length:
2993

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGG|GTAAGCCAA
5'SS Class:
major
3'SS Sequence:
TCCCCCCCTGTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TGCTCAC
U12 Branch Point Sequence:
TGGTGCTCACCA
Flanking Amino Acid:
ADVIAQARKKGTVVYGEPIT
Intron Amino Acid Position:
375

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
78.7
0.68
1.1
65
42.7
Major BPS
69.8
0.49
1.1
71.3
36.7
Major PPT
71.8
0.49
0.7
65.8
23.1
Minor 5ss
36.7
-1.5
3
39.2
46.1
Minor BPS
46.1
-0.3
2.2
60.13
45.6

Associated Gene:

Gene:
DPYSL2
Ensembl Gene ID:
ENSAPLG00000007595
Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000007994
1901873 - 1950071
48199