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Intron Name: Anas_platyrhynchos_platyrhynchos_23_1916589_1917462_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1916589 - 1917462

Intron Length:
874

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATCTCGT

5'SS Class:
major

3'SS Sequence:
CTCTCTGCCTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTAAAT

U12 Branch Point Sequence:
TCTTTTTTCTCT

Flanking Amino Acid:
HAENGDIIAEEQQRILELGI

Intron Amino Acid Position:
312

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.8
0.54
1.2
65.3
46

Major BPS
82.3
0.8
0.9
87.6
25.7

Major PPT
70.5
0.46
0.8
69
31.5

Minor 5ss
47.6
-0.2
2.6
68.2
42.5

Minor BPS
42.9
-0.4
3.5
74.38
43.4

Associated Gene:

Gene:
DPYSL2

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1901873 - 1950071
48199