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Intron Name: Anas_platyrhynchos_platyrhynchos_23_19313_26844_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19313 - 26844

Intron Length:

7532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGAGCA

5'SS Class:

major

3'SS Sequence:

CCTGTGTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

GGATTCAAAAAT

Flanking Amino Acid:

HAFILYNKYITLFIEKLPRH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.3

68.7

36.4

Major BPS

68.1

0.45

73.5

28.6

Major PPT

78.4

0.64

0.9

71.2

38.5

Minor 5ss

32.1

-2

3.3

39.6

Minor BPS

44.7

-0.3

1.9

60.63

42.1

Associated Gene:

Gene:

STAMBP

Ensembl Gene ID:

ENSAPLG00000005548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017577

19098 - 34623

15526

ENSAPLT00000005765

18031 - 34623

16593