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Intron Name: Anas_platyrhynchos_platyrhynchos_23_1937095_1938417_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1937095 - 1938417

Intron Length:
1323

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAAGTGAA

5'SS Class:
strong_major

3'SS Sequence:
CCTGTTTACCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTTAC

U12 Branch Point Sequence:
TGTGTCTGACTT

Flanking Amino Acid:
ADIYMEDGLIKQIGENLIVP

Intron Amino Acid Position:
147

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.1
0.85
0.9
80.4
26.8

Major BPS
71.4
0.53
1.1
63.4
44

Major PPT
72.4
0.51
0.9
65
40.4

Minor 5ss
33.7
-1.9
3.2
40.3
40.1

Minor BPS
48.8
-0
1.8
68.72
42.7

Associated Gene:

Gene:
DPYSL2

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1901873 - 1950071
48199