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Intron Name: Anas_platyrhynchos_platyrhynchos_23_1979338_1980115_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1979338 - 1980115

Intron Length:

778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

ATTGTGTTAATT

Flanking Amino Acid:

WSSRPENIPPKEFHFRHPKR

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

82.9

23.9

Major BPS

84.4

0.85

34.5

Major PPT

86.2

0.81

0.7

83.9

24.2

Minor 5ss

38.1

-1.3

49.4

41.3

Minor BPS

55.9

0.26

2.1

77.24

40.1

Associated Gene:

Gene:

BNIP3L

Ensembl Gene ID:

ENSAPLG00000008709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009075

1978209 - 1984798

6590