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Intron Name: Anas_platyrhynchos_platyrhynchos_23_1998831_1999206_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1998831 - 1999206

Intron Length:

376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TCAACTAAACTT

Flanking Amino Acid:

KFECCWNGSDSIVMTGSYNN

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

78.2

0.7

79.9

32.6

Major PPT

81.6

0.71

0.7

76.1

25.9

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

39.6

-0.7

53.65

42.3

Associated Gene:

Gene:

PPP2R2A

Ensembl Gene ID:

ENSAPLG00000008811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019688

1998551 - 2040967

42417

ENSAPLT00000009226

1998551 - 2035412

36862