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Intron Name: Anas_platyrhynchos_platyrhynchos_23_1999299_2000103_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1999299 - 2000103

Intron Length:

805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTGGT

5'SS Class:

major

3'SS Sequence:

ATCTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TTCAGTTTATCT

Flanking Amino Acid:

MENRPVETYQVHEYLRSKLC

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

70.7

39.5

Major BPS

71.6

0.54

33.1

Major PPT

84.9

0.78

0.8

76.9

36.7

Minor 5ss

40.6

-1.1

3.2

58.8

45.7

Minor BPS

49.5

0.04

2.1

71.95

45.3

Associated Gene:

Gene:

PPP2R2A

Ensembl Gene ID:

ENSAPLG00000008811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019688

1998551 - 2040967

42417

ENSAPLT00000009226

1998551 - 2035412

36862