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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2000274_2000917_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2000274 - 2000917

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTGTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TATTTTTGTACA

Flanking Amino Acid:

ASALCDRHSKLFEEPEDPSN

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.5

28.7

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

84.3

0.77

0.9

80.1

37.1

Minor 5ss

45.3

-0.5

2.8

64.3

39.9

Minor BPS

0.09

1.8

68.7

37.7

Associated Gene:

Gene:

PPP2R2A

Ensembl Gene ID:

ENSAPLG00000008811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019688

1998551 - 2040967

42417

ENSAPLT00000009226

1998551 - 2035412

36862