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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2001083_2001954_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

2001083 - 2001954

Intron Length:

872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTATCTTTT

5'SS Class:

strong_minor

3'SS Sequence:

CAAAATGGTGTAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

AATTCCTTAACA

Flanking Amino Acid:

WHLEITDRSFNIVDIKPANM

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.2

66.9

39.1

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

50.4

0.01

1.1

42.4

Minor 5ss

83.6

1.13

1.4

85.4

24.4

Minor BPS

87.8

1.18

0.9

87.56

29.3

Associated Gene:

Gene:

PPP2R2A

Ensembl Gene ID:

ENSAPLG00000008811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019688

1998551 - 2040967

42417

ENSAPLT00000009226

1998551 - 2035412

36862