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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2002133_2002484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2002133 - 2002484

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTACCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

GTACACTTAACT

Flanking Amino Acid:

RDPTTVTTLRVPVFRPMDLM

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

73.7

32.5

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

80.4

0.68

0.9

36.4

Minor 5ss

26.1

-2.7

2.9

22.6

37.5

Minor BPS

68.8

0.67

1.5

39.5

Associated Gene:

Gene:

PPP2R2A

Ensembl Gene ID:

ENSAPLG00000008811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019688

1998551 - 2040967

42417

ENSAPLT00000009226

1998551 - 2035412

36862