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Intron Name: Anas_platyrhynchos_platyrhynchos_23_202328_215917_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202328 - 215917

Intron Length:

13590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

CAAGCCTTGATT

Flanking Amino Acid:

IYSMTAIALDRYMAIIHPLQ

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

71.9

34.5

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

75.2

0.57

0.8

68.2

25.3

Minor 5ss

39.7

-1.2

2.9

50.9

45.8

Minor BPS

60.4

0.41

1.4

68.22

43.1

Associated Gene:

Gene:

TACR1

Ensembl Gene ID:

ENSAPLG00000008032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008345

201927 - 224748

22822

ENSAPLT00000020183

201927 - 221931

20005