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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2033371_2035405_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2033371 - 2035405

Intron Length:

2035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

ATTTTTTGCATT

Flanking Amino Acid:

MAGAGGGNDIQW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

0.62

1.4

85.7

34.9

Major PPT

86.6

0.82

0.8

84.6

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

49.9

0.08

1.8

74.22

37.3

Associated Gene:

Gene:

PPP2R2A

Ensembl Gene ID:

ENSAPLG00000008811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009226

1998551 - 2035412

36862