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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2071457_2072453_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2071457 - 2072453

Intron Length:

997

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTAAAT

Flanking Amino Acid:

AFVDFVENDKEQGNEKTNNG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

76.2

39.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.8

0.81

0.8

77.5

36.2

Minor 5ss

38.4

-1.3

3.6

56.8

41.8

Minor BPS

75.1

0.86

1.2

87.12

31.6

Associated Gene:

Gene:

EBF2

Ensembl Gene ID:

ENSAPLG00000009260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036458

2068972 - 2194724

125753

ENSAPLT00000033630

2068972 - 2203356

134385

ENSAPLT00000009678

2068972 - 2203442

134471