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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2073309_2079814_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2073309 - 2079814

Intron Length:

6506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTCTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

AATTCTTCCATC

Flanking Amino Acid:

RVLLTHEVMCSRCCEKKSCG

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.9

75.7

36.7

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

80.6

0.69

0.7

73.6

31.4

Minor 5ss

36.1

-1.6

3.3

47.1

48.3

Minor BPS

48.6

-0.1

1.9

61.96

37.8

Associated Gene:

Gene:

EBF2

Ensembl Gene ID:

ENSAPLG00000009260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009678

2068972 - 2203442

134471

ENSAPLT00000036458

2068972 - 2194724

125753

ENSAPLT00000033630

2068972 - 2203356

134385