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Intron Name: Anas_platyrhynchos_platyrhynchos_23_216113_220275_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

216113 - 220275

Intron Length:

4163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTTGG

5'SS Class:

major

3'SS Sequence:

TCACTTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAA

U12 Branch Point Sequence:

ACACACTCAACA

Flanking Amino Acid:

PEHSTEVYGKTYHFCMTILI

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.3

65.8

42.7

Major BPS

65.6

0.39

0.9

67.3

29.6

Major PPT

79.8

0.67

0.8

37.1

Minor 5ss

35.5

-1.6

2.8

39.4

39.7

Minor BPS

49.1

-0

1.7

58.05

40.6

Associated Gene:

Gene:

TACR1

Ensembl Gene ID:

ENSAPLG00000008032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020183

201927 - 221931

20005

ENSAPLT00000008345

201927 - 224748

22822